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Gut microbes battle a common set of viruses shared by global populations

The human gut is home to a teeming ecosystem of microbes that is intimately involved in both human health and disease. But while the gut microbiota is interacting with our body, they are also under constant attack from viruses. In a study published online in Genome Research , researchers have an... Read More

BacterioFiles Micro Edition 93 - Virus Visualizes Neural Networks

This episode: Scientists use a modified rabies virus to map brain connections!





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TWiV 189: Five postdocs in Glasgow



Hosts: Vincent Racaniello, Vanessa Cowton, Mary Holton, Mark Robinson, Swetha Vijayakrishnan, and Gavin Wilkie


Vincent returns to t... Read More

Convulsion Risk From CSL Flu Vaccine Linked To Components

Convulsions in children immunized with a CSL Ltd. (CSL) flu shot probably were caused by an excessive immune response to viral components in the vaccine, according to preliminary findings of a two-year study.

Use in children younger than 6 years of CSL’s Fluvax vaccine, to protect against the... Read More

Built-in dengue virus killer found in humans

Scientists may have hit gold in their fight against dengue. They have located a human antibody that can neutralise and kill its virus within two hours.

Significantly, they have also identified a way to reproduce this antibody in large quantities, potentially opening the door to a cure for den... Read More

How bacteria break down human food

Last weeks post on the changing composition of bacteria in the vagina generated a lot of interest, and as there’s been quite a of talk about the human microbiome (all the bacteria that live on the human body) at the moment I thought I’d stick with the theme. This weeks post is about how bacteria... Read More

Frequency comb helps kill dangerous bacteria

Scientists in the US have used an optical-frequency comb – a laser that emits light at a range of equally spaced frequencies, like the teeth on a comb – to monitor how well a device designed to kill dangerous bacteria does its job. The comb was used to measure the concentrations of ozone, hydrog... Read More

Lessons from the ASM meeting (#ASM2012)

Some lessons and notes from the ASM meeting from Jonathan Eisen on "The Tree of Life" Read More

Notes from the GSC13 session on "Microbiology of the Built Environment"

Notes and links relating to meeting of the Genomics Standards Consortium (GSC13) session on microbiology of the built environment. Read More

Collection of microbe-themed blogs and podcasts

A collection of links to blogs and podcasts that either focus entirely on microbes or partially on microbes. Other suggestions wanted. Read More

Gut bacteria: Each species may need its own kind

Last week, scientists reported on a 5-year study of all the bacteria that inhabit the human body – 100 trillion of them, weighing 2 to 6 pounds total (in a 200-pound person) – and of 10,000 different types, though not all of them will reside in any one particular person.

This week, an interes... Read More

Bacteria from Antarctica aids the setting up of bio-toilets in India

It is invisible to the naked eye and originated in the uninhabitable climes of Antarctica. This humble bacteria — known as Psychrophile — holds the potential to solve India's sanitation problem in the years to come. The Defence Research and Development Organisation (DRDO) is using these bacteria... Read More

H5N1 Bird Flu Pandemic Potential Revealed

Two papers published this week, and one last month, reveal the pandemic potential of H5N1 "bird flu". One identifies four, another identifies five, genetic changes the virus would have to undergo before it could spread easily in humans, and the third paper suggests some of these changes are alre... Read More

U-M forecasters predict second-smallest Gulf of Mexico 'dead zone'

The Gulf of Mexico’s dead zone for 2012 is expected to be the second smallest on record—but not because of any cutback in nitrogen use.

Farmland runoff containing fertilizers and livestock waste—some of it from as far away as the Corn Belt—is the main source of the nitrogen and phosphorus tha... Read More

Animal reservoir mystery solved

A team of scientists at Washington University in St. Louis has been keeping a wary eye on emerging tick-borne diseases in Missouri for the past dozen years, and they have just nailed down another part of the story.

They knew from earlier work that the animal reservoirs for the diseases includ... Read More

Germ Culprits in Moldy, Water-Damaged Buildings Identified

Two specific strains of bacteria that appear linked to indoor mold caused by water damage have been identified by researchers.

Bacterial contamination in water-damaged buildings can cause health problems such as infection and respiratory conditions such as asthma. But until now, no specific b... Read More

Rare Drug-Resistant Bacteria Spotted in U.S. Hospital

A rare type of deadly bacteria was found in two patients in a Rhode Island hospital in 2011, but swift treatment and infection control measures stopped any further spread, a new government report shows.

The bacterium -- called New Delhi metallo-beta-lactamase (NDM)-producing Klebsiella pneumo... Read More

How the fungus that can punch through Kevlar becomes a cereal killer

There’s a microscopic fungus that can starve nations and punch through Kevlar. It causes disease on such as scale that its blight can be seen from space. It’s called Magnaporthe oryzae and it causes a disease known as rice blast. The fungus doesn’t infect humans, but it does kill rice. It kills ... Read More

How to Give Ferrets A Highly Contagious, Sneeze-Transmissible Version of the Bird Flu

Only a few key mutations could cause the avian influenza virus to become airborne and transmissible among mammals, according to a controversial new paper publishing online today. In detailed research involving ferrets, researchers at the Erasmus Medical Centre in the Netherlands engineered a pot... Read More

Influenza H5N1 virus versus ferrets, round two

The second of two papers on avian influenza H5N1 virus that caused such a furor in the past year was published today in the journal Science. I have carefully read the paper by Fouchier and colleagues, and I assure you that it does not enable the production of a deadly biological weapon. The resu... Read More

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